Our extraction method for the M4 file structure is currently incomplete, but our tools are sufficient for extracting apps. You will need scripts from Keitai Scripts on GitHub.
Step 1: assemble_m4.py
The assemble_m4.py will divide the regions of the nor dump
python assemble_m4.py <file name>.bin
Example
python assemble_m4.py N506i-2_PF38F4462LLYDB0-f1.bin
Step 2: convertForEmulator_m4.py
The convertForEmulator_m4.py script will extract the DoJa files from the regions inside the firmware dump.
python convertForEmulator_m4.py m4_out_dir model_name
Example
python convertForEmulator_m4.py N506i-2_PF38F4462LLYDB0-f1.bin_output N506i